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What if you could join a rapidly growing company and play a critical role in bringing new medicines to patients by helping scale the programmable infrastructure behind a new human cellular biology platform? About Vesalius Vesalius Therapeutics is pioneering a new platform to generate breakthrough treatments for common diseases. Our platform combines large-scale human genetics, genomics, stem cell studies, high-dimensional cellular phenotyping, and artificial intelligence to uncover causal biology and identify optimal intervention points for new therapies. Vesalius was founded in 2019 by Flagship Pioneering. Role Overview Vesalius is seeking a highly motivated Automation Engineer to help scale our automated biology platform. This early-career role sits at the intersection of biology, robotics, software, and data systems, with a focus on programming, data handling, systems integration, and workflow automation. You will partner with scientists, automation operators, IT, and data science teams to translate biological workflows into robust automated workcells and ensure experiments generate reliable, traceable, analysis-ready data. This role goes beyond operating instruments—it is focused on making automation programmable, integrated, scalable, and reliable. Key Responsibilities Develop and optimize high-throughput automated protocols that translate biological workflows from the bench to integrated workcells. Partner with scientific teams to design automation solutions that balance biological fidelity, throughput, cost, reliability, and lead time. Collaborate with scientists and automation operators on workflow execution, troubleshooting, training, and continuous improvement. Develop and maintain automation scripts, scheduling workflows, error handling, monitoring, and instrument-control methods using tools such as Python, C#, JSON, platform APIs, and vendor-specific languages. Validate automated workflows against benchtop methods, assessing precision, accuracy, reproducibility, and data quality. Build integrations between automation platforms, instruments, LIMS/ELN, imaging systems, databases, and downstream data pipelines, including structured metadata capture and data handoff. Integrate and troubleshoot new instruments and workcell components, including instrument interfaces or drivers where needed. Apply sound software engineering practices including version control, testing, debugging, modular design, and documentation. Program liquid-handling and robotic workflows across platforms such as Hamilton STAR, Dynamic Devices Lynx, HighRes Biosolutions/Cellario, and similar systems. Develop barcode to workflow mapping to enable batch and sample tracking. Create and maintain SOPs, method documentation, validation reports, troubleshooting guides, and other technical documentation. Qualifications Bachelor's or master's degree in computer science, engineering, bioengineering, automation, robotics, biomedical engineering, computational biology, or related field. Early career experience in laboratory automation, scientific software, robotics, biotech automation, or a related environment. Experience with biological workflows such as mammalian cell culture, cell-based assays, high-content imaging, high-throughput screening, NGS, or iPSC systems is strongly preferred. Hands-on experience with automated liquid handlers, robotic systems, integrated workcells, laboratory scheduling software, or instrument-control methods. Experience developing and troubleshooting automated biological workflows, liquid-handling methods, instrument workflows, software tools, or systems integrations. Ability to troubleshoot across software, hardware, liquid handling, instrument communication, data, and sample-tracking workflows. Programming experience in Python and/or C#, or comparable languages, with familiarity with Git/version control, testing, debugging, and code documentation. Strong communication and documentation skills with the ability to work effectively across scientific, automation, IT, and data teams. Preferred Experience Exposure to cloud infrastructure such as AWS, event-driven integrations, or data pipelines supporting automated laboratory environments. Experience with Hamilton STAR, Dynamic Devices Lynx, HighRes Biosolutions/Cellario, Beckman Biomek, Tecan, Biosero, Celltrio, Ginkgo Automation RAC systems, or similar platforms. Experience with platform APIs, instrument drivers, SQL/databases, LIMS/ELN, automated metadata capture, or laboratory scheduling software. Experience building tools for sample tracking, run monitoring, QC reporting, workflow validation, or automated data handoff. At Flagship, we accept impossible missions to enable bigger leaps. Our core values guide us through uncertainty and toward lasting impact. We are an equal opportunity employer . All qualified applicants will be considered for employment without regard to race, color, religion, sex, sexual orientation, gender identity, national origin, disability, protected veteran status, or any other characteristic protected by law. We recognize that great candidates often bring unique strengths without fulfilling every qualification . If you have some of the experience listed above but not all, please apply anyway. We are dedicated to building diverse and inclusive teams and look forward to learning more about your background and interest in Flagship. Recruitment & Staffing Agencies : Flagship Pioneering and its affiliated Flagship Lab companies (collectively, “FSP”) do not accept unsolicited resumes from any source other than candidates. The submission of unsolicited resumes by recruitment or staffing agencies to FSP or its employees is strictly prohibited unless contacted directly by Flagship Pioneering’s internal Talent Acquisition team. Any resume submitted by an agency in the absence of a signed agreement will automatically become the property of FSP, and FSP will not owe any referral or other fees with respect thereto. The salary range for this role is $108,000 - $170,700. Compensation for the role will depend on a number of factors, including a candidate’s qualifications, skills, competencies, and experience. Vesalius Therapeutics currently offers healthcare coverage, annual incentive program, retirement benefits and a broad range of other benefits. Compensation and benefits information is based on Vesalius Therapeutics's good faith estimate as of the date of publication and may be modified in the future. Privacy Notice for Applicants: When you apply for a role at Flagship Pioneering or one of its portfolio companies, we collect and use personal information you provide (such as your name, contact details, work history, and application materials) to evaluate your application, communicate with you, and comply with legal obligations. Your application data is processed through Greenhouse, our applicant tracking system, and may also be reviewed using AI-assisted screening tools. We do not sell your personal information. California residents have rights under the CCPA/CPRA including to know, delete, and opt out of the sharing of their personal information. If you are located in the EU or UK, we process your data under GDPR and you have rights to access, rectify, and erase your data. To exercise your rights or for questions, contact privacy@flagshippioneering.com.
Here's how to pick the right one and stand out in your application.
144.883Jobs
31.687IN
81%EN
That number is real. WorkMundi's database shows 144,883 open engineer roles across the world. India has the most with 31,687 jobs, followed by the United States with 30,084. If you just finished reading one job ad and felt paralyzed by choice, you're not alone—but this scale is actually an advantage. It means you can afford to be selective.
Start by geography and language. The majority of engineer ads—117,837 of them—have the job posting text written in English. Use that as one filter, but remember: the ad text language tells you nothing about whether the role actually requires you to speak English day-to-day. Read the job description carefully. Then check which countries have the volume you're targeting. Singapore, Poland, and Australia round out the top five after India and the US.
Next, learn who's hiring. Accenture has posted 2,801 engineer roles. andurilindustries, speechify, and jobgether are also actively recruiting. If you're applying to one of these names, research their hiring patterns and interview style before you apply. That homework pays off.
When you interview, expect the question every engineer hears: 'Tell me about a time you had to debug a problem that wasn't in your job description.' Have a specific story ready—not a general one. Name the tools, the deadline pressure, and what you learned. Hiring managers listen for whether you see problem-solving as part of the role itself, not a favour.